PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0057s0131.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family WRKY
Protein Properties Length: 330aa    MW: 36265.5 Da    PI: 6.3872
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0057s0131.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.41.6e-29152210259
                          --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                           D ++WrKYGqK++kgs +prsYYrC+s+ gC ++k+ve+s+ dp++++itY+ +Hnh+
  Kalax.0057s0131.1.p 152 TDLWAWRKYGQKPIKGSFYPRSYYRCSSSkGCAARKQVEQSSLDPNIFTITYTADHNHP 210
                          699************************998****************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.807.2E-30137212IPR003657WRKY domain
SuperFamilySSF1182909.15E-25146212IPR003657WRKY domain
PROSITE profilePS5081130.285146212IPR003657WRKY domain
SMARTSM007743.6E-34151211IPR003657WRKY domain
PfamPF031062.2E-24153210IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    Send to blast
MIMDDNWGLH AVVNGCTQQA QEWNNAVDIQ EELLFHMGQN HHHQLPDLPF DLISSPMSFD  60
LHELEDIYKL PFGDGLASGV MLASGSNPKL AVEMQQHHQQ YEVFDGSSSS AYHLPGDNGT  120
AFVAAAAASN RAKRKNQQKR VVQHVTANGL STDLWAWRKY GQKPIKGSFY PRSYYRCSSS  180
KGCAARKQVE QSSLDPNIFT ITYTADHNHP HPTRRSSLSG VSKNKKASSA PPNKKPTPPP  240
PPPTSSLPLK DSSSSNSPTM LNMPAPTTPL MVENTSREDG IKEECSTVAV EDGSMMDLGC  300
LGFEEEIGEM GFDGYQSWFP HWLDGRSTC*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A6e-16140212274WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
SwissprotQ9FLX87e-47WRK27_ARATH; Probable WRKY transcription factor 27
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52830.18e-41WRKY DNA-binding protein 27